1) DOCUMENTATION
"Solution Accelerator for Exchange Consolidation and Migration",
http://go.microsoft.com/fwlink/?LinkId=34985
"Upgrading Exchange Server 5.5 to Exchange 2003 in a Medium-Sized
Organization", http://go.microsoft.com/fwlink/?LinkId=34703
"Migrating from Legacy Exchange",
http://www.informit.com/articles/article.asp?p=349747
"Exchange 2003 Migration Roadmap",
http://redmondmag.com/columns/article.asp?EditorialsID=663
"Inter-Org Distribution List Migration",
http://www.msd2d.com/Content/Tip_viewitem_03NoAuth.aspx?id=f9bcb0b1-7263-4d97-9b
49-14ac6d62ff26§ion=Exchange
2) YOUR DOUBTS
Since you're doing a migration by installing a new organization, you can
keep Public Folders synchronized by using the Inter-Organization Replication
Tool:
You'll need the Inter-Organization Replication Tool
(http://www.microsoft.com/downloads/details.aspx?FamilyId=E7A951D7-1559-4F8F-B400
-488B0C52430E&displaylang=en)
"Configuring the InterOrg Replication Tool"
http://www.msexchange.org/tutorials/Configuring-InterOrg-Replication-Tool.html
As for your Exchange Directory, ADC will sync between Exchange 5.5 Dir and
Active Directory.

Signature
Blog "subject: exchange"
http://spaces.msn.com/members/ehlo
> We have a single Exchange organization with nine NT 4.0 domains each
> with its own Exchange site that share the same DNS domain for mail.
[quoted text clipped - 12 lines]
>
> - Mark